BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F06LP1|AL426243
(777 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1772 1538 0.0
>3x_Contig1772
Length = 25851
Score = 1538 bits (775), Expect = 0.0
Identities = 776/777 (99%)
Strand = Plus / Plus
Query: 1 atggtctatcttctctggcatattcaatgaagacaaactaaaagaagctttgaactttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20135 atggtctatcttctctggcatattcaatgaagacaaactaaaagaagctttgaactttcg 20194
Query: 61 cattagcgagcacaaacaatcaatctcgaccaaaacagaaaaacggagaaaacggagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20195 cattagcgagcacaaacaatcaatctcgaccaaaacagaaaaacggagaaaacggagtag 20254
Query: 121 ctcaacgtcaaaccccacgccggctccaccatgtaaagaggttctagattcagtgagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20255 ctcaacgtcaaaccccacgccggctccaccatgtaaagaggttctagattcagtgagttt 20314
Query: 181 atctagtaagtyatcagacggtaatgatgggactgggctcaacttgccccagttgaaagt 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20315 atctagtaagtcatcagacggtaatgatgggactgggctcaacttgccccagttgaaagt 20374
Query: 241 caatgaggttgacactcactggtttaatgcgattcttcgaaacaacaacacacattcgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20375 caatgaggttgacactcactggtttaatgcgattcttcgaaacaacaacacacattcgag 20434
Query: 301 ctggaaccgcgatgattttgataatcatgctgttccacctggctcaattacgacacaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20435 ctggaaccgcgatgattttgataatcatgctgttccacctggctcaattacgacacaatc 20494
Query: 361 gccgcttgtaatagaggccgatggcttactctctgatttggcaaaggctccaaatatcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20495 gccgcttgtaatagaggccgatggcttactctctgatttggcaaaggctccaaatatcag 20554
Query: 421 cctagatgagatgtttttgaacccatctttccaacaagagagtcttattcagcagttgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20555 cctagatgagatgtttttgaacccatctttccaacaagagagtcttattcagcagttgca 20614
Query: 481 aaacttatcagaaagacaaaatagtggcatgatgttgcccaattctaccaacaatttggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20615 aaacttatcagaaagacaaaatagtggcatgatgttgcccaattctaccaacaatttggg 20674
Query: 541 tggctcgataaccggggcaccgttctctaatgatcatttaaaaaatccaccaaaaacgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20675 tggctcgataaccggggcaccgttctctaatgatcatttaaaaaatccaccaaaaacgaa 20734
Query: 601 cttcaattctataatcgattctacggacttagattatttactttttaacggagatatata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20735 cttcaattctataatcgattctacggacttagattatttactttttaacggagatatata 20794
Query: 661 aagaagctttaatatgctaggcaatattgcaatttttcagaattatgaaatttaacatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20795 aagaagctttaatatgctaggcaatattgcaatttttcagaattatgaaatttaacatct 20854
Query: 721 cccgcctgttggtgcatcaaggagtgtgctgttcctcgtctgggctatagtgtctta 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20855 cccgcctgttggtgcatcaaggagtgtgctgttcctcgtctgggctatagtgtctta 20911
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5474
Number of Sequences: 1807
Number of extensions: 5474
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 777
length of database: 10,358,551
effective HSP length: 16
effective length of query: 761
effective length of database: 10,329,639
effective search space: 7860855279
effective search space used: 7860855279
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)